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The box plots (Figure S1) display the results obtained for each type of normalization, both with and without background subtraction (also referred as background correction).
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The branches being tested for positive selection are referred to as the foreground branches, while the remaining branches on the tree are referred to as background branches.
The branches being tested for positive selection are referred to as the foreground branches, and all other branches on the tree are referred to as background branches.
Throughout this paper, emissions from within the area of the printed DNA spots are referred to as spot-specific emissions and emissions that are not spot-specific are referred to as background emissions.
To validate the results from Datamonkey, we also performed analysis of positive selection using the branch-site model in PAML for Group 3. The branches being tested for positive selection are referred to as foreground branches, and all other branches on the phylogenetic tree are referred to as background branches.
The model made a distinction between two types of mortality, one that reflected the elevated mortality among children with CHD hospitalized for RSV, referred to as case fatality, and one that related to any other cause of death, referred to as background mortality.
These conspicuous declines in diversity are referred to as mass extinctions; they are distinguished from the majority of extinctions, which occur continually and are referred to as background extinction.
This process is referred to as background poling.
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