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Chen, C.-Y C.-Yal. Improvet alcestry Improvede using weights from externancestryence panels.
The prevalence of any given SNP may be estimated with population-specific reference panels.
To expand genomic coverage and to interrogate additional SNPs, we imputed SNPs from the 1000 Genomes Project reference panels.
However, these studies generally rely on imputing genotypes from multiple ancestries from 1KGP but not against population-specific reference panels.
Evaluation of transethnic fine mapping with population-specific and cosmopolitan imputation reference panels in diverse Asian populations.
Reference panels consisted of 200 haplotypes.
In the 1000 Genomes reference panels, there are currently no Native American reference panels available.
Such local reference panels are used to complement public reference panels.
Generally, public reference panels are consists of normal samples [ 8].
Imputation was performed separately for these two reference panels.
For comparison, we sample 50 reference panels at random.
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