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Additionally, a file with ERV reference name equivalence lists (Additional file 1) was input to RE ANNOTATE.
a HGVS Name Human Genome Variation Societyy reference name (Reverse direction of the SNPs sequences for BCL11A gene).
This reference name can then be used to access resources from a variety of databases (GenBank, ENSEMBL etc).
It is a Palm Oil (Elaeis Guineensis) phytocomplex, prepared for the purposes of the study, as soft gel capsule formulation and labeled as OXI-3 (internal reference name ALAB103).
In order to locate genomic resources for a given gene using a familiar name, a reference name has to first be identified from GenBank (or other databases such as Swiss-Prot, TrEMBL [ 2] or ENSEMBL [ 3]).
The user can navigate the database in two ways: (1) by directly introducing a human gene/protein reference name or (2) by providing a chromosome and an approximate coordinate (and then the closest upstream and/or downstream human gene with at least one orthologous gene will be shown).
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All the author's signature flourishes are here, including a significant piece of music (Liszt's "Le mal du pays" underscores this novel), an impressive range of cultural reference (name-checks include Arnold Wesker, Pet Shop Boys, Barry Manilow and Thomas Harris) and a deep interest in sex.
For all that signification is posterior to reference, names do have signification as well.
Intuitively, however (and also according to the current dominant theories of reference), names do no such thing; names denote individuals: 'Quine' denotes Quine, not his individual essence.
Some domain specific background knowledge needs to be provided beforehand, in particular the type hierarchy, the relations of interest (with their range and domain types), and at least a basic set of entities along with some of their reference names.
In each of the given cases, the system implicitly learns from these corrections, e.g. by adding new reference names for an entity when an entity is corrected or directly derive relation instances when they are added or corrected.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.
Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com