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The standard techniques of efficient programming, such as reducing time complexity, are honored wherever possible.
In computational RNA and protein studies, a maximal loop size is sometimes imposed as a heuristic for reducing time complexity by one order.
The major changes for MSCYK are a large reduction of M, and B fixed at 1, rather than being a variable defined by the model, reducing time complexity to O(LW) ~ O(N).
For example, when looking for motifs 10-bp long in promoter analysis Weeder collects from the sequences the occurrences of 10-mers up to three substitutions: but in ChIP studies it often suffices to allow one or two substitutions to capture the main motif bound by the TF investigated, thus reducing time complexity both in theory and in practice.
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They can reduce time complexity.
Whereas, non-vascular based method intends to analyze non-vessel properties of retinal images in order to reduce time complexity.
Clustering reduces the search space of components by grouping similar entities together thus ensuring reduced time complexity as it reduces the search time for component retrieval.
It is also shown experimentally that MapReduce framework provides better scalability and reduced time complexity while considering large number of text documents for summarization.
A heuristic Internet data budget management algorithm (H-IDM) is also presented, which is designed to reduce time complexity and computational overhead of the O-IDM system.
We then develop a heuristic IDM algorithm (H-IDM) designed to reduce time complexity and computational overhead while maintaining efficient data budget utilization.
Short random walks present an interesting, yet not that popular alternative to these global measures, especially provided that they can give us interesting information about the neighbourhood structure of the network and are computable locally, which reduces time complexity of such operations.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com