Exact(2)
TopHat2 reduces alignment to pseudogenes by aligning reads preferentially to genes within provided annotation.
This modelling reduces alignment errors around low-complexity regions separated by short spacers and affects the calculation of sequence similarity.
Similar(58)
To reduce alignment errors, we also align the reverse query sequence to the reverse reference sequence, namely reverse reverse alignment, in addition to the forward forward alignment.
The analysis includes spacers used to reduce alignment errors.
Reduced alignment and increased entanglement are the reasons of this decrease.
We found that knockout of syndecan-1 reduced alignment of vascular smooth muscle cells to the nanogrooves under inflammatory treatments.
Planar integration of various optical systems has been developed in recent years as a way to reduce alignment problems and to build small size, robust monolithic devices.
It is shown that parallelness of the laser beam to the rotation axis is a key factor to reduce alignment errors.
In other methods this position can only be inferred by using additional secondary structure information to reduce alignment errors.
Phylobayes analyses with the CAT model were also done on each reduced alignment.
This method clusters similar subsequences from a database to perform an efficient seed search and ungapped extension by reducing alignment candidates based on triangle inequality.
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