In this article, we present a new software tool, called JULIDE, that we developed to perform the 3D reconstruction, intensity normalization, volume standardization by 3D image registration and voxel-wise statistical analysis of autoradiographs of mice.
In this article we introduce JULIDE, a software toolkit developed to perform the 3D reconstruction, intensity normalization, volume standardization by 3D image registration and voxel-wise statistical analysis of autoradiographs of mouse brain sections.
It turns out that SFP provides a unified framework for the study of many significant real-world problems such as in signal processing, medical image reconstruction, intensity-modulated radiation therapy, et cetera; see, for example, [2 5].
Since its origin in 1994 by Censor and Elfving [1], the split feasibility problem (SFP) has been rapidly investigated and studied because of its applications in different areas such as signal processing, phase retrievals, image reconstruction, intensity-modulated radiation therapy, etc. (see, for example, [2 8] and the references therein).
Acquiring images with near isotropic voxels allows improved post-processing manipulation of the images with multi-planar reconstruction, maximum intensity projection (MIP) and volume rendering.
In Flash 3D reconstructions, the intensity in the tail and the edge of the head of the pancreas (close to the kidney) was lower compared to that in the other parts of the pancreas.
The split-feasibility problem was originally introduced by Censor and Elfving [2] for modeling phase retrieval problems, and it later was studied extensively as an extremely powerful tool for the treatment of a wide range of inverse problems, such as medical image reconstruction and intensity-modulated radiation therapy problems.
Many applications of the split feasibility problem (SFP), which was first introduced by Censor and Elfving [1], have appeared in various fields of science and technology, such as in signal processing, medical image reconstruction and intensity-modulated radiation therapy; for more information, see [2, 3] and the references therein.
From these image stacks three-dimensional reconstructions (maximum intensity projections) were produced with Imaris software (Version 4.0; Bitplane, Zurich, Switzerland).
The site of origin, distribution and course of the sequestered tissue were evaluated using multiplanar reconstructions, maximum intensity projections and volume-rendered images by adjusting the value of translucency or slab thickness.
The source images, multiplanar reconstructions, maximum intensity projections and volume-rendered images were presented on-screen, thus allowing for adjustment of the appropriate threshold of the window width and level.
