Sentence examples for reconstruct sequences from inspiring English sources

With some methodologies it is possible to reconstruct sequences at the internal nodes, called ancestral sequences, and also to estimate rate of evolution and to date speciation events.

To determine the mechanisms by which these specificities evolved, we used maximum likelihood phylogenetic models to reconstruct sequences for all ancestors of the CMGC kinases.

Two additional sequences were either not in the database or were composites made to reconstruct sequences more closely resembling non-mutated forms of the retrotransposons.

ESTs/cDNAs that overlap with the erroneous sequence but differ from it in the region affected by the error are used to reconstruct sequences.

Currently, we do not know the full details of deeper eukaryote phylogeny, probably because the ability of Markov models to reconstruct sequences (or the tree) falls off exponentially at deeper times (Mossel and Steel 2005).

If sequence searches in Step 2 identified fragments that overlap with the erroneous sequence but differ from it in the region affected by the error, then FixPred uses the overlapping fragments to reconstruct sequences (Supplementary Figure S2 ).

When using a nucleotide probability threshold in the sequence reconstruction, the primers generated from these reconstructed sequences have significantly less mismatches to their target complement, compared with both the frequency consensus sequences as well as the nearest neighbor sequences.

The two reconstructed sequences with and Hermite coefficients are illustrated in Figures 4(b) and 4(c), respectively.

The quality of the PRISM reconstructed sequences is on the other hand more uniform across frames; nevertheless the presence of few very low quality blocks inside each frame impairs the overall perceived quality.

The reconstructed sequences for the authentic ERTBV viruses, ERTBV-A, -B and -C were deposited in DDBJ: accession nos.

Sequences of partial alleles with multiple nearest neighbors were reconstructed with each of the nearest neighbors, resulting in 10 779 reconstructed sequences for 6489 partial alleles.