Your English writing platform
Discover LudwigExact(1)
In the present article, we consider a different reconciliation criterion for refining a polytomy, which consists in minimizing the number of non-apparent duplication (NAD) nodes.
Similar(58)
In his little tractates, written between 1070 and 1091, Bernold of Constance listed several criteria for the reconciliation of conflicting texts, including authenticity of the text; identity of the author; difference between law, counsel, and dispensation, between universal and local law; difference of time and place; and different meanings of a word.
We show experimental evidence that reconciliations computed under the parsimony criterion can efficiently correct erroneous parts of gene trees inferred from sequence data.
Finally, we considered the reconciliation mutation cost as another evaluation criterion.
While the mutation cost of reconciliation has been used previously as an optimization criterion for choosing an appropriate binary tree, here we use an alternative criterion, which is the minimization of NADs.
The decision about the "optimal" forest management strategy has to address multiple criteria and seek for a reconciliation of interests in order to meet the different and partially contradictory stakeholder demands.
Furthermore, if we consider different gene trees and reconciliation models and use the same filtering criteria as Stolzer et al.
Reconciliations are most often inferred on the basis of a parsimony criterion: a cost is given to each event type, the total cost of a reconciliation is the sum of the costs of the individual events it uses, and a reconciliation of minimum total cost is sought for.
Criteria are discussed for defining the required reconciliation performance.
Finally, it remains an open question whether some such additional criteria could change the complexity of the reconciliation problem when only feasible (acyclic) solutions are to be found or enumerated.
All the results of this study point to the necessity of introducing new criteria besides parsimony in the model for an optimal reconciliation.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com