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The BioCreative CHEMDNER challenge invites the development of systems for the automatic recognition of chemicals in text (CEM task) and for ranking the recognized compounds at the document level (CDI task).
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The recognition of two fractions in the meteorite macromolecular materials provokes a reassessment of previously recognized compound-specific stable carbon isotope patterns.
Since the fundamental DNA sequence reading feature of netropsin, distamycin, and the lexitropsins is the hydrophobic interaction of their pyrrole/imidazole rings with nearby nucleotide bases, strategies to enhance and extend this interaction have been critical in the design of new minor groove recognizing compounds.
First one is a separation of tokens with a hyphen "-", which often leads to mistakes in recognizing compound terms.
Our data recognized that compound 6p could be considered as a starting point for development of new JmjC inhibitors.
Due to the poor performance of current scoring functions in estimating binding affinity and hence in ranking docked ligands, it is recognized that compound selection based on calculated scores is not sufficient and visual inspection is often necessary.
Our interpretation of this finding is that our models do not so much recognize active compounds but rather filter out inactive compounds.
Automatic recognition of metabolic process concepts is performed by the built-in GGP recognizer of the GENIA Tagger and OscarMER that recognizes chemical compounds and action terms.
Following the widely accepted similarity principle [1] for which structurally similar compounds should act similarly, we have to expect also that similar proteins cavities recognize similar compounds.
Thus, SPAN can be used in the primary steps of peptide bioactive compound discovery to recognize bitter compound fractions.
Thus, he does not recognize sentential compounds, such as conjunctions and disjunctions, as single assertions.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com