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Step 2 Development of judgment matrices by pair wise comparisons: The criteria, sub-criteria and alternatives are compared pair-wise and defined from reciprocal comparison of different levels.
However it is also surprising, given that the relatively high correlation is found to be unique when the reciprocal comparison (BSE ic vs Me7 ip) is made (r = 0.29).
Moreover, we performed the reciprocal comparison involving mapped spruce genes against the pine sequence database.
A reciprocal comparison was performed to ensure one-to-one matches between the scaffolds and BAC contigs.
Below we describe ULs that were identified as differentially expressed by reciprocal comparison of read frequencies of the three non-normalized cDNA libraries.
Two protein sequences are regarded as likely orthologs if the reciprocal comparison results in a bidirectional hit rate (BHR) larger than a given threshold.
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The results of the pairwise and reciprocal comparisons between S19, 9 941 and 2308 are given in the Supplemental Table S3.
Pairwise and reciprocal comparisons were made between S19 and the published genome sequences of 9 941 and 2308, to identify genes that are 100% identical and consequently, those non-identical ORFs with any differences (Table 4).
To identify potential genes that differ between the attenuated strain S19 and other two B. abortus virulent strains, 2308 and 9 941, pair-wise and reciprocal comparisons were performed by aligning the predicted genes of one strain to the whole genome sequence of the second strain and vice versa.
Self and reciprocal comparisons were avoided.
All pairwise comparisons correspond to average values of reciprocal comparisons between species.
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