Sentence examples for reads was set from inspiring English sources

The maximum allowed distance between reads was set to 500 bp.

For the detection of somatic variants, a bimodal strategy was applied with tumor variants called under stringent criteria, whereas variants in control tissue were called using less stringent criteria: A minimum threshold for reads was set with variants of 15% of all reads at a given position in tumor.

For paired-end reads, the insert between paired reads was set from 1 base to 10 kilobases, allowing them to span introns of varying sizes in the genome.

The cut-off length of seeding reads was set at 3 606 bp in order to serve as a reference for the recruitment of shorter reads for preassembly.

For both the single and multiple K-mer values assembly, the average insertion length for paired-end reads was set to 170 and the minimum sequence length to 200 bp; all other parameters were left as default values.

The maximum number of read mismatches and read gap length were set to 2. Multiple mappings of single reads was set to 10 (default: 20) to decrease the bias for genes with more multimapping reads.

Alternatively, if the number of reads is set to achieve a given depth of coverage on a hypothetical species with low abundance then high abundance species can be substantially oversampled [5].

Thus, in many HTS studies, multialigned reads are set aside, if not completely discarded.

The resulting reads were set up to contigs with similar assembly techniques.

The average and standard deviation of the insert size for paired-end reads were set at 500 and 50 bp, respectively.

This is obviously understood because when the number of shared l-mers between reads is set to be larger, the probability of identified correct overlap of reads is higher.