Sentence examples for reads overlap from inspiring English sources

In the first attribute, if the positions of the two reads overlap with each other on the genome, then the overlapping region is designated as a true edge; otherwise, it is designated as a false edge.

Many reads overlap lincRNAs that contain rRNA transcripts, such as the 28S rRNA element in lincRNA chr11 84867425-84942100.

Then all the reads were realigned onto contigs again according to the paired-end reads overlap relationship, and all these contigs were joined into 79,825 scaffold sequences.

One of the first steps in creating an assembly from WGS data is to determine which reads overlap each other based on comparison of their sequences.

Coverage is overestimated when reads overlap.

One methylated CpG site is located in the region where the reads overlap.

The so-called dynamic overlapping strategy is to compute the reads overlapped with seed in intervals composed of maximum overlap and minimum overlap.

We considered reads overlapping with mature miRNAs if at least 17 bases are included in miRNAs and their isomiRs.

BEDTools (Version 2.9.0) (Quinlan and Hall, 2010) was used to compare the genomic coordinates to find reads overlapping with mature miRNAs.

Using only reads mapping to a single gene, we counted the reads overlapping each transcript in the correct genomic orientation.

The final sequence was verified by manual inspection comparing it with the mapped reads by checking that the aligned reads overlapped without discontinuities.