Sentence examples for reads collection from inspiring English sources

In the next step, the B. oleracea sequences of 25 tRNAs, 39 rRNAs, 1 snoRNA and 64 repeat-associated RNAs were downloaded and matched to the unique tags to remove ncRNAs from the reads collection.

We anticipate that in 1 2 years solutions processing a 1 billion 100 bp reads collection in a few hours on a PC will appear, but their main data structure may be the good old suffix array rather than, e.g., the FM-index.

Other books followed, including a memoir, Winston Churchill: His Life as a Painter (1990) and a widely read collection of her parents' letters, Speaking for Themselves (1998).

These 3' reads were reverse-complemented to produce a 5'-3' oriented read collection.

In this method, a CRP was used for short read collection for HLA genes.

The basic building block of the following methods is simply counting the number of times a particular string occurs in the read collection.

In order to identify gene structures, we mapped our M. galloprovincialis read collection (SRA ID: PRJNA88481) on the genomic contigs resulting from this study.

As a result, 2,766,852 reads in G1245N tissue and 3,319,704 reads in G1245T tissue were found to have nucleotide added at their 3' ends, individually accounting for 14.0% and 12.8% of read collection used for mapping.

For example, to estimate the per-base sequencing error rate, we sample a read from the entire read collection, use the FM-index to find reads that it overlaps, then count the number of mismatches in the overlapping set.

Instead of performing direct contig assembly from all 454 reads [ 19], we preceded the assembly with a clustering step, which resulted in partitioning the read collection into groups of overlapping sequences.

Owing to the large size of our read collection and for improving analysis confidence, we have selected the unique reads with copy number equal or greater than three for subsequent trimming adaptor and genome mapping steps.