Sentence examples for reads and identifies from inspiring English sources

CD-HIT-454 takes raw 454 reads and identifies the artificial duplicates, which are commonly present in 454 pyrosequencing reads.

It analyzes mapped sequence reads and identifies clusters based on significant deviations from a uniform piRNA distribution, using different types of information, including the density of mapped reads, strand asymmetry, frequency of putative piRNA loci with U at the first position of the sequence, or A at Position 10.

Thus we have proposed a novel method, SAW, which is able to cluster short reads and identify candidate splicing sites based on minimal absents words before the alignment of short reads to genome sequences.

This de novo "genome" was used to align the reads and identify mutations as above.

We used Scalpel to assemble the reads and identify INDELs under both single mode and quad mode.

Raw reads and identified variants have been deposited in public databases, so that they may be accessed or incorporated into automated pipelines.

Our first major objective was to assemble a reference transcriptome which could then be used to map reads and identify SNPs in both varieties of Douglas-fir.

Briefly, we record all lk-mers derived from the library sequences in a bitfield, scan all reads and identify matches with quick bit-lookups.

CIMS [ 78] uses the diagnostic deletions present in CLIP-seq tags to help pinpoint the location of RBP binding site by clustering reads and identifying reproducibly occurring deletions.

Using a bioinformatics approach, our initial attempt at discovering putative gene fusions relied on analyzing single-end reads and identifying reads that aligned across exons of two different genes.

The second objective is predicting single-copy reads and identifying the putative SNPs by mapping multiple genome equivalents of SOLiD, Solexa or Roche 454 reads to the annotated, single-copy Roche 454 reads.