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Today Ball State, located in Muncie, has a Center for Middletown Studies, which collaborated on the reading database.
For the taint marked data, the behavior of the reading database will be processed.
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Data are being released through SEED platform (http://:www.theseed.org) and GenBank short read database.
We also uncovered small amounts of non-repetitive sequences within the centromeric satellite read database.
YR provided read wrangling support by collecting sequence data and building the reads database prior to assembly.
It is notable, however, that we find overlap with sites of conserved sequence elements identified within the centromeric read database.
K-mers not specific to the centromeric database, as demonstrated by an exact match to reads outside of the defined read database, were eliminated.
Three out of the six genes could find 3 haplotypes from our clean reads database, confirming that ecotype MT-5 is also a hexaploid (data not shown).
This enables Hadoop Map/Reduce (15) jobs to read database records from a local server; hence, system throughput is not bounded by network bandwidth.
The previous immunoproteogenomics studies (Boutz et al., 2014; Cheung et al.., 2012; Sato et al.., 2012) conducted searches on a database of unique Ig-seq reads that we refer to as unique reads database.
If the pea genome was sequenced, these additional reads could be retrieved from the read database by mapping them to the genome, as has been done for maize 454 reads [ 30].
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