Sentence examples for read the alignments from inspiring English sources

We then used the seqinr package [ 44] in R to read the alignments, and subsequently calculated gene-by-strain dN and dS values using the kaks command.

▪ Create perl scripts that read the alignment results and convert them to standard GFF3 format.

If another exact seed with smaller offset exists in the read the alignment is filtered as a duplicate, otherwise the alignment is recorded.

By recognizing the formation and by reading the alignment and stances of the offensive linemen, Strahan was often able to anticipate the play before the ball was snapped.

After scanning through all sequence reads, the alignment tool generates a file containing the collected information.

For each read, the best alignment to the genome was kept in the output, with the exception of chimeric reads, for which multiple alignments were retained.

The receiver reads the defensive alignment and alters his pattern to run where the defender isn't.

Then, only the read alignments at the heterozygous sites are kept for haplotype reconstruction.

Zooming out displays more of the read alignments across the reference sequence.

It is possible to zoom in and view the read alignments at the nucleotide level (Fig. 3b).

Once all the conversions are performed, a key aspect for the efficient alignment of the reads is the alignment strategy.