Sentence examples for read orientation from inspiring English sources

This maintained both read orientation and relative coverage bias in the simulated data.

Another important issue for downstream analyses that comes with library preparation is read orientation.

According to the separation distance and read orientation, SVs can be inferred.

CREST [ 16] is another method that utilizes split mapped reads as well as paired-end read orientation.

Across all SSPACE assemblies only 1 1.8% of the MP read pairs satisfied the perfect match, read orientation, and insert size criteria (Table  3).

By selecting the option to show read orientation, it can be seen that the unmapped reads point towards the insertion location.

Viewing also provides more detail than a univariate score, including coverage, error locations within reads and read orientations.

The construction techniques for such libraries often result in read orientations different from those of typical paired-end libraries.

In this case, the combination of two read orientations implies ~2000 non-redundant dimensions within a 4096-dimensional signature vector.

In addition, all called variants should ideally be supported by data from both read orientations (forward and reverse).

SVachra calls large insertions-deletions, inversions, inter- and intra-chromosomal translocations, reporting breakpoints in the inward facing orientation thereby eliminating the contradictory outward facing read orientations.