Sentence examples for read dataset from from inspiring English sources

We present a read dataset from whole-genome shotgun sequencing of the model organism Escherichia coli K-12 substr.

We test the above methods on a long read dataset from HapMap sample NA12878 that was produced using a fosmid-based technology (Duitama et al., 2012).

We defined two read datasets from this merging step: Group A that included all reads and Group M that included only a subset of reads that could be merged.

Interestingly, one region of 900 bp, identified in the Phi-191 and encoding a tail fiber, was present in all the vtx2-phages from EAHEC and was also present in the short reads dataset from the EAHEC O111 H21.

At our last enumeration, 24 academic de novo genome assemblers, each possessing its own range of application, are developed for short reads datasets from different sequencing platforms in the last few years.

From the graphs, the proposed algorithm achieves the best results when m is from 0 to 5 for short read datasets, and from 20 to 65 for long reads datasets.

The read datasets thus obtained from single-cells suffer from amplification bias, resulting in orders of magnitude difference in coverage (Raghunathan et al., 2005) and the complete absence of coverage in some regions.

Human genome build 37.1 was downloaded from the RefSeq genomes ftp site [ 12]. S. aureus and human chromosome 14 sequencing read datasets were downloaded from GAGE project [ 13].

In total 30 putative chimeras were identified and removed from the read datasets.

BiMeta and MetaCluster 2.0 are tested on the long read datasets from R1 to R9 (presented in Table 1).

In the present study, eight short reads assemblers, representing four various assembly strategies, were benchmarked against two types of simulated short reads datasets derived from four different genomes.