Sentence examples for read assignment from inspiring English sources

However, reads having many homologous sequences in the database due to high conservation among microbial families and lineages, lead to a rather "diffuse", but still correct read assignment: due to gene sharing, MEGAN assigns these reads to high-order taxa closer to the root (e.g. at genus level), thus avoiding probable false-positive assignments (MEGAN uses an LCA-based algorithm [13].).

Reprocessing a subset of AS samples using IndexDP and repeating the analysis ruled out technical differences in read assignment as the cause of this representation bias.

The difference in read frequencies among members of the same named species cannot be ascribed to a lack of sequence differences among the two strain's genomes causing a failure in read assignment.

More recent attempts to address systematically the ambiguity in read assignment have followed two complementary strategies.

Read assignment uncertainty inherent in the RNA-seq data analysis may introduce noise and false positives.

We first applied metaMix on a popular benchmark dataset, for which the community composition and the read assignment is known.

Who would read assignments on lockdown, in solitary confinement, on their job assignments and anywhere they could find the time and space to read.

Using simulations, we evaluated the robustness of deML read assignments for datasets at various error rates.

5′ UTR read assignments were based on canonical transcript splice isoform as in hg19.

Significantly identified genes, which have read assignments above the threshold set, were determined by ranking the genes based on the number of read assignments, followed by selecting the top ranking genes that captured 95% of the assigned reads.

An efficient estimation can be performed by the introduction of unobserved latent variables that code for the read assignments.