Sentence examples for read amounts from inspiring English sources

Using the read amounts for each annotated isotig (from a total of 15,671), we identified 7,756 transcripts.

Overall, 37 genes had peak read amounts within cluster A (the set of fruit-induced genes), and 113 genes within cluster B (the set of AZ-induced genes).

Generally, the parameters, transcriptional read amounts and reads per kilobase of coding sequence per million reads (RPKM) are used for assessing the gene expression levels when analyzing RNA-seq data.

Read amounts for each of the 15,671 annotated isotigs (6,533 for fruit, and 9,138 for AZ) lead to the identification of 7,756 transcripts in our experiment (Additional file 3), which 4,391 were differentially expressed genes (DEGs); hereafter, these are called group I (P < 0.01), whereas the other genes (43%) having either low read abundance or non differential representation are called group II.

The new loci defined by the 8145 reads amounted to 3026 (Table  1, Additional file 6).

After removing adapters, cleaned reads amounted to 2,378,135 sequences corresponding to 670,645 unique sequences.

Three replicates of randomly chosen samples of 250 million reads amounted to 10X coverage of 98.4% of the 90,440 contigs.

Using 100-bp paired-end reand, assumingming a 500-bp long exon, 300 mapping reads amount to an average read depth of ∼100.

In each cluster, the number of GS FLX reads amounted to, with large fluctuations, 15-20% of the total number of reads in that cluster.

High throughput sequencing of transcriptome libraries using Illumina GA IIx platform generated an aggregate of 183.7 million purity filtered reads amounting to 15.2 Gb of data.

A total of 334,540 reads (amounting ~ 62 Mb of 8 snake venom gland transcriptomes) were simultaneously sequenced in two runs of the Genome Sequencer FLX System.