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Simulation studies based on 1000 repeated re-samplings of (sample size: 1%, 5%, 10%and25%5%) the full data are used to asses and compare the methods discussed above.
We found that for the application to the real-world microarray datasets it was critical to perform at least 1,000 bootstrap re-samplings and 1,000 sample splits in order to obtain adequately de-noised MSE curves over the range of sample sizes.
Due to computational limitations, the two-dimensional FS of wild and cultivated carrots was projected down to the same smaller sample size of 10 by averaging over all possible re-samplings of the larger sample size data [ 23].
Only one sample was collected at each time point and no re-samplings were performed.
We performed a bootstrap simulation (with 1,000 re-samplings with replacement) for each of the six comparisons by reducing the sample sizes of Gv and Gs transcripts to be the same as that of the Ga transcripts.
Numbers on branch nodes represent bootstrap values (100 re-samplings).
The robustness of inferred topologies was tested by 1000 bootstrap re-samplings of the neighbor-joining data.
The tree topology of the neighbor-joining data was evaluated by Bootstrap analysis with 100 re-samplings.
A 95%-confidence interval of €-3.500 to 36.700 was computed using non parametric bootstrapping (Figure 1). Figure 1 Distribution of incremental costs per saved life during index stay (reference: 2005 reimbursement) for an emergency medical services-based strategy of transporting every patient to primary PCI; result of a bootstrap analysis with 5000 re-samplings.
Branch support was assessed by the bootstrap test with 1000 re-samplings.
Bootstrap analysis was based on 100 re-samplings using puzzleboot ver. 1.03 (available from www.tree-puzzle.de).de
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