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Based on the heat plot that color-coded the range of abundances (Figure 2), the phylum Proteobacteria was made up of mainly genera Citrobacter, Klebsiella, Shigella, and Enterobacter, with the first three genera detected only in eczema infants but not in non-eczema infants.
Seven plasma miRNAs, spanning a range of abundances, were detected in all sample volumes tested.
The urinary proteome has a high dynamic range of abundances (>10).
In the present study, 466 TF mRNAs were differentially expressed over a wide range of abundances during SE.
These genes were chosen, based on their corresponding protein levels, for which a wide range of abundances was observed.
The variation in these ratios between 12 samples run in parallel was determined, and the coefficient of variation (CV) was calculated for oligosaccharides with a range of abundances.
Abundance predictions were considered correct if the range of abundances that a model predicted a species should obtain 95% of the time encompassed the observed abundance value.
Moreover, proteins are produced over a wide range of abundances (from dozens to millions of copies per cell), and are subject to numerous variations including alternative isoforms, proteolytic cleaveage and post-translational modifications (PTMs).
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PSM sites should be used to derive reference values, i.e. range of abundance and presence of different relevant species of soil organisms.
Another problem is detection of proteins over their natural range of abundance [ 8].
For this study, technical aspects of platforms performance were investigated using eight different RNA standards, mimicking transcripts covering a wide physiological range of abundance levels.
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CEO of Professional Science Editing for Scientists @ prosciediting.com