Sentence examples for random transcript from inspiring English sources

For cortex gene list, 1,000,000 random transcript lists with 87 transcripts were constructed and the sum of expression levels across each gene list was used to predict survival in a univariate Cox model and the p-value was recorded.

It can be interpreted as an estimate of the probability that a random transcript from the nth (mixed) tumor cell population (represented by t n ) originated from a cancerous cell.

If the set of NCBI sequences is assumed to be representational of the real transcripts, one can expect that more than 80% of the length of a random transcript is present in our assembly.

In addition to these exploratory techniques, we compared the median gene expression value and the variance of the expression values of the predicted targets in each tissue to the distribution obtained for equally-sized random transcript selections.

The distance cutoff used to identify novel transcript – annotated gene pairs was defined using random transcript pairs distance distribution, calculated by 1,000 permutations of novel transcript loci along each chromosome (for each permutation, keeping the same number of novel transcripts on each strand of each chromosome).

Thus, sequencing of random transcript cDNA clones that results in short partial sequences, known as expressed sequence tags [ 32] (EST) or, more recently, methods for full length isolation and sequencing of random clones from cDNA libraries have been used [ 33, 34].

The analysis of four random transcripts of the downregulated fraction revealed a short poly(A) that was completely removed upon egg aging (Fig. 6A).

From this cDNA library, 1152 random transcripts were selected and sequenced, resulting in 985 high quality sequences.

The first author coded all of the transcripts in Atlas.ti (Atlas.ti version 7, Berlin, Germany) with a co-investigator (CA) checking random transcripts for coding consistency and code drift.

Among the 4,279 transcripts bound by ADAR1, 2,866 (67%) were also bound by HuR in PAR-CLIP, which is significantly more than observed in random transcripts (36%; χ, p < 0.0001), showing that HuR binds to ADAR1 targets in vivo.

We have verified the present microarray results with real-time reverse transcriptase PCR for 12 random transcripts and for 8 gerbera MADS-box genes (See Additional files 1 and 2).