Sentence examples similar to query variant from inspiring English sources

The conservation scoring system relies on calculated "delta scores" – differences in estimated alignment scores between query and homologs, and query variants and homologs.

McCarthy and colleagues [ 22] have demonstrated that both the choice of gene set and software package can result in substantially different annotation results for the same set of query variants.

Amino acid substitutions introduced into query variants that reduce the similarity (calculated using substitution matrix BLOSUM62) of protein sequence to the functional homologs are considered to cause a damaging effect.

For example, the rule to call a frameshift variant is that a variant falls in coding sequence and that the absolute difference between the lengths of the reference and alternative alleles is not divisible by 3. The VEP systematically checks all rules against the query variants and outputs all consequence terms that hold for each variant.

In light of well-reported increased genetic diversity in populations with African ancestry [ 9, 10], our replication strategy not only focused on the reported SNPs but also included querying variants in LD with the reported SNPs.

A query requesting variants in the RD pocket revealed multiple kinases with recurrent variants at pocket positions (Table 1).

I will quickly cover recent results of a collaboration with NASA in which we used a D-Wave 2X adiabatic quantum computer for solving certain query optimization variants.

We have proposed several new query optimization variants to capture the context of approximate and Cloud based query processing and are currently exploring the use of machine learning for improved execution cost estimation.

The rapid advances in DNA sequencing platforms will help build the tools to query those variants in the near future in a comprehensive fashion, mitigating some of the shortcomings of HapMap-inspired SNP arrays.

The DIVAS web interface provides several ways to query for variants, including genes and coordinates.

You will use this session to run SQL queries on variants.