Sentence examples for query position from inspiring English sources

For each query position q identified in Step 2, we perform an alignment with the seed S inserted in its corresponding position to generate the final alignments.

The alignment score of SP5 for aligning query position

Notably, none of these potentials explicitly take into consideration relevant known mutations at the query position.

Since some sequences in a block may only partially align with the query protein and may not cover the query position, the number of query-position-covering sequences in each block is a different variable and is also considered here.

Syntenic depth refers to the number of syntenic regions identified in a target genome for a given query position.

The ratio of the two (RatioNN) may suggest functional implications of the protein sequences surrounding the query position.

Instead of inserting a seed into every position of a query sequence, Adaptive GDDA-BLAST embeds a seed at the query positions where the seed is likely to be extended to an alignment (see the Method section for details).

Therefore, we can significantly reduce the computational complexity of the alignment process by inserting seeds only into a limited number of query positions that are likely to be extended.

The orthologous candidate RNA editing sites referring to identical query positions are given on the same line in spite of different gene labels in the reference database entries.

If at least one of the hits fulfils the limit given by the "filter threshold", the hit that is longer and has higher identity to the reference within a range of same query positions is kept.

Because Pro-Maya uses a diverse set of features, including predictions using two other methods, it also performs slightly better than other methods in the absence of additional experimental data on the query positions.