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The relevance feedback considers a single query interaction, while the collaborative retrieval scenario exploits multiple interactions available in different queries submitted to the search system.
In other words, F1 and F2 represent function assignments to proteins in the query interaction pair with modular domains D1 and D2, respectively.
After the query interaction, one extra triangle is formed since only the nodes b and c were previously interacting.
Newly formed number of triangles due to query interaction Δ TR c, t), are found similarly as equation (8).
The effect of query interaction on the original graph structure is captured by change in GE (i.e. Δ GE c, t)), given similarly like equation (8).
Figure 3 d) shows two different type of query interaction with the same graph, where an edge length is proportional to its weight.
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IDLE frame also contains NAV to preserve the channel for selection query interactions.
It is now easy to query interactions from diverse and distributed interaction resources and group evidences relating to the same interaction.
NATALIEQ with the topology score function at E-value cut-offs larger than 10-10 is able to match all (17) query interactions and pairs FZD1 and FBpp0077788 with a bit score of only 150 (E-value: 6 · 10-38).
After matching proteins and interactions, the web service server sends annotation attributes for matched query interactions in the form of publication references (Pubmed identifiers), interaction detection methods, database references (such as IntAct and MINT) and pathway annotations (i.e. pathways that contain both participants of a protein protein interaction) to the client plugin.
Our scheme realizes access control on documents without requiring per-query interaction between the data owner and each client.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com