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TM-align, for instance, is particularly robust in quantifying comparisons between sets of proteins with great disparities in sequence lengths, but it only indirectly captures hydrogen bonding or secondary structure order conservation which might be better metrics for alignment of evolutionarily related proteins.
To screen the main polyphenols that are responsible for the antioxidant properties of the EAE, individual polyphenols were identified and quantified by comparisons with available standards based on recorded retention time (Table 4).
Compounds were identified and quantified via comparisons to standards.
Where measured weight was not recorded, recalled weight in 1996 was used, adjusted for recall bias quantified by comparisons of measured and recalled weight at 21 years (available in 694 individuals).
Fatty acid methyl ester peaks were identified by comparison of retention times with a standard mixture of fatty acid methyl esters (Supelco) and quantified by comparison with the internal standard detector response.
The bacterial attachment and detachment were quantified through comparison of mass recoveries of bacterial breakthrough curves.
The samples were quantified by comparison to known standards purchased from Sigma Aldrich.
The effect of alloying elements on the mobility is quantified by comparison with the pure metal.
Finally, samples were quantified by comparison with a standard curve generated from serial dilutions of affinity-purified ATH35L protein.
Using these results, flame conditions are quantified in comparison to other well-characterized reactions including hydrocarbon and propellant fires.
As expected, the introduction of salt water during testing greatly increased crack growth rates and can be quantified for comparison.
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