Sentence examples for quality portions from inspiring English sources

Vector and poor quality portions of sequence were trimmed and clustered by sequence alignment into singletons and contigs using Sequencher Genee Codes Corporation, Ann Arbor, MI, USA).

The raw cDNA sequences were subjected to 5'-trimming to eliminate the vector and 3'-trimming to eliminate low quality portions.

Poor quality portions (Phred quality < 20) were trimmed from the ends of the raw sequences using the FASTX-Toolkit, and any reads < 20 bp were discarded (fastq_quality_trimmer -t 20 -l 20; http://hannonlab.cshl.edu/fastx_toolkit/).edu/fastx_toolkit/

All reads were processed by mirabait [ 31] to remove contamination from the TruSeq adapters, fastq_quality_trimmer (from FASTX_TOOLKIT,  http://hannonlab.cshl.edu/fastx_toolkit/) to remove low quality portions at both ends, JELLYFISH [ 32] to obtain k-mer frequencies in all the libraries, and QUAKE [ 33] to correct sequencing errors (Additional file 7: Table S1).

The quality portion of the survey found that international recruiters appreciated soft skills like adaptability, communications and the "ability to work in a team," more than leadership qualities or "the ability to work under pressure".

Yahoo! will post enhanced disclosures on the "Traffic Quality" portion of its website about where Yahoo!

After removing contamination from TruSeq adapters and the low quality portion of the reads using the methods mentioned above, we applied three methods to assemble the transcriptomes: (1) de novo assembly by Trinity [ 37], (2) reference-based assembly by TopHat [ 38] (v2.0.10) and Cufflinks [ 39] (v2.2.1), and (3) reference-guided assembly by Trinity.

Quality control was performed to remove homopolymer-rich sequences and poor-quality portions of individual reads (for details, see Wei et al., 2014).

To obtain useful insights from the NGS data, it is essential to control low-quality portions of the data affected by technical errors such as air bubbles in sequencing fluidics.

After removing the low-quality reads (around 0.18% of all reads) and low-quality portions (Q value <30) of each of the raw reads, the RNA-sequencing data for each sample were mapped to the GRCm38/mm10 mouse reference first.

This enables virtually three-dimensional evaluation of the distribution of low-quality spots in the flowcell to infer whether the cause of low-quality portion is three-dimensional phenomenon (e.g., air bubbles or debris in sequencing fluids) or two-dimensional phenomenon (e.g., cracks on a flowcell or imaging errors).