Sentence examples for quality of alignment from inspiring English sources

The top match produced by Phyre is the protein sequence that showed the highest raw alignment score with the query sequence and is based on the number of aligned residues and the quality of alignment.

Q-score is the ratio between RMSD and the number of aligned amino acids and is considered as a measure of quality of alignment (for identical structure Q = 1).

High texture in < 001 > direction will determine the quality of alignment and seed size the diameter of nanorods.

Multiple sequence alignment viewers enable alignments to be visually reviewed, often by inspecting the quality of alignment for annotated functional sites on two or more sequences.

This choice was based on the image quality (no preparation artifacts), degree of symmetry and quality of alignment.

Alignment colors vary from green to red based on the quality of alignment.

As the detection of imprecise intron losses generally depends on the quality of alignments, only intron losses positioned at well-aligned regions are readily observed.

These algorithms consider a heterogeneous set of biological features together with other standard MSA scores in order to predict the quality of alignments.

To understand the quality of alignments produced by our approach it is essential to objectively quantify alignment accuracy.

Nonetheless, it is feasible to use the ML method in order to compare the quality of alignments by measuring their likelihood values, and we use this below to compare different alignment strategies.

As there is no proper approach to directly assess the quality of alignments of such large sizes, we compared the resulting phylogenies to previously published phylogenies that were based on multilocus data of genes evolving at slower, more appropriate rates.