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"The quality filter will be pretty stringent.
The new filter is based on an optional "quality filter" previously made available to verified users.
Overall, CPODs therefore produced fewer dolphin detection positive hours than PAMGuard when using either train quality filter setting.
High quality (filter: pass) candidates from the Dindel output were extracted as our final list of small insertions and deletions.
Unlike the quality filter, however, the new feature is automatically on for all users and cannot be turned off.
Quality filter mapping 5.
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Quality filtering.
Quality filtering and demultiplexing were performed as described previously59.
Curated RNA sequence data was quality filtered using FASTX toolkit.
Reference mapping and normalization for filtered transcriptome were performed after quality filtering and assessment.
Sequence datasets were quality filtered, normalized and clustered into species-level operational taxonomic units (OTUs).
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