Sentence examples for quality control thresholds from inspiring English sources

A further 467 SNPs would fail quality control thresholds.

Quality control thresholds for sample inclusion in CNV analysis included a high call rate (call rate ≥95%) across SNPs, low s.d. of normalized intensity (s.d. ≤0.3), low absolute genomic wave artefacts (|GCWF| ≤0.02) and low numbers of CNVs called (#CNVs ≤100).

This indicates that the DNA pooling step was very accurate, but because of bias introduced in the sequencing (most likely at the PCR amplification stages) single genotyping validation is required for all but allele frequencies passing the most stringent quality control thresholds.

Sample and assay quality control thresholds were set to 90%.

Only data which passed appropriate quality control thresholds were included for analysis.

Stringent quality control thresholds were applied to both individual cohorts and then the merged cohorts.

d, Data quality control threshold based on the distributions of Pearson's correlation values of sgRNA fold change values between replicates of the same cell line (in green) and all possible pairwise comparisons (in grey), considering the 838 highly informative sgRNAs (described in the Methods).

While the signal intensity of the FFPE samples was consistently lower it was still well above the quality control threshold (p95>2500) in all cases.

Quality control threshold was performed as per PennCNV guidelines [27].

All samples and SNPs met the quality control threshold of >90% genotyping success.

The variants passing the quality control threshold were used for downstream analysis.