Sentence examples for quality blast from inspiring English sources

Transcripts with no BLAST hits or poor quality BLAST hits (E value > 10−12) were checked through additional BLAST searches to the NCBI database, marsupial transcriptomes or to marsupial genomes on Ensembl.

SY63 has not only the traits of high yield, acceptable grain quality, blast resistance and wide adaptability, but also is suitable for cultivation as a ratoon rice.

Additionally, the long contig assemblies by the other programs generate more high quality BLAST hits than those found for VELVET.

Further, using a high quality BLAST alignment alone for the assignment gives this approach the ability to also assign a gene that lies in a gap in the human genome sequence.

If the genome address assignment agreed with the BLAST result, then the EST was assigned to the gene, if they disagreed, only a high quality BLAST result allowed EST to gene assignment (>= 92% identity, >= 100 bp alignment).

Investigating them more closely, however, revealed a large fraction of short contigs, redundant contigs, and a lower number of high quality BLAST hits in comparison to the other two assemblers.

Instabilities can be expected due to deep excavations in rock masses of low geomechanical quality, blasting practices and heavy precipitation.

Similarly, the iterative graph-based clustering procedure implemented in TRIBE-MCL is robust against merging clusters that share only few edges, which allows the robust identification of true gene families even in the presence of lower-quality BLAST hits or promiscuous domains [21].

A further 547 (4.7%) of the genes in our array had poor-quality Blast hits (e-value > 0.1) and were therefore omitted from further analyses.

This leads to accurate identifications of gene families even in the presence of lower-quality BLAST hits or promiscuous domains (Frech and Chen 2010).

To reduce low-quality BLAST matches, we filtered out those with sequence similarities of < 90% and alignment lengths smaller than 200 amino acid residues to retain a total of 7,779 contigs (Table 1).