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We present a formalization of this problem within a relational (constraint-based) framework, and devise solutions to automatically determine qualitative values for a device model.
Owing to the lack of data in the initial stages of the project, the model will require the use of qualitative values for estimating the probability of leakage risk.
We only consider five qualitative values for the sake of simplicity.
The SBML-qual file must contain initial qualitative values for each component of the regulatory network.
The qualitative values for consequence and likelihood (as defined in Table 1) were inserted in the threat table, columns 3 and 4, for each identified threat.
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As for the set of quantity spaces Q, different qualitative reasoning engines may have different forms of representation, but all qualitative variables are restricted to only take qualitative values from their associated quantity spaces.
Chi-square test was used to compare qualitative values, whereas for quantitative values Students' t-test or non-parametric Mann-Whitney/Wilcoxon test were used whenever appropriate.
As supporting definitions, it offers a safe URI format, a recommended set of restricted numeric and string types, formats of the main accession numbers, as well as recommended qualitative values and identifying names, for example for the main public data sources (values for which stable, widely used vocabularies are still missing).
Univariate analysis was performed through a Chi-2 or fisher exact test for qualitative values and a Student t test for continuous variables.
Statistical analysis was performed with Student´s T test for parametric paired data, Wilcoxon´s Test for non parametric and Stuart-Maxwell for qualitative values.
Once all links on the map had been fully articulated with the rankings of each of the 93 linguistic terms (three for each link), we refined the virtual FCM (shown in Figure 4) by substituting quantitative values for the previous qualitative values (see Figure 8).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com