Sentence examples for qc pass from inspiring English sources

The "All" group thus contains samples with merged QC pass lanes, samples with merged QC fail lanes, and samples with merged QC pass and QC fail lanes.

Samples lacking two replicate lanes in either the QC pass or QC fail group were excluded from this analysis.

Variation in replicate correlation between samples was also noticeably less in the QC pass group (relative standard deviation = 6.7% vs. 27.1%).

The first iteration of samples prepared for sequencing had a QC pass rate of ~30%; more recent samples had a pass rate of >50%.

For the reproducibility comparison (Additional file 1), Pearson r was calculated using 2 replicate lanes corresponding to each sample represented in the QC pass and QC fail groups.

To assess clustering quality and accuracy, 600 unique QC pass SNPs and 600 unique QC fail SNPs were selected at random and manually called using a modified version of Evoker (Morris et al., 2010).

> -wrap-foot> Calls from Illuminus and GenoSNP produce the most discordant results at QC (with 5157 and 8815 unique QC passes and fails, respectively) whereas GenCall and optiCall appear to have more overlapping QC outcomes with other callers.

Each validation run was validated based on standard curve and the following acceptance criteria for QCs: accuracy of 70 130% from nominal value, CV ≤ 25%, and at least 4/5 determination of each QC passing the criteria.

The percentage of total reads that passed quality control as described in Materials and Methods (% QC Passed) and the number (Mapped Reads) and percentage of reads that were successfully mapped to the mouse genome (% Mapped) are shown.

As a last step, the QC-passed reads were re-paired for alignment.

If QC is passed, the primary hits are selected for a second round of screening.