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Attempts to reduce these errors include variations on quartet puzzling which limit the quartets that are examined, provide different weights for individual quartets, or modify the puzzling procedure [ 18- 20].
As incorrect quartet propagation will still occur in the puzzling procedure, we would not expect this method to compete with the many variations of ML based quartet puzzling algorithms that have been developed over the years.
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For ML reconstruction, the parameters were set as follows: quartet-puzzling tree-search procedure, 25,000 puzzling steps and the substitution model set to Jones-Taylor-Thornton [ 47].
The ML analysis was performed by using the quartet puzzling tree search procedure, with 25,000 puzzling steps.
Treepuzzle analyses were performed by means of the quartet puzzling tree search procedure, with 25,000 puzzling steps [ 45].
A guide tree is made using TreePuzzle (v5.2), using the tree reconstruction option, quartet puzzling tree search procedure, clocklike branch lengths off, approximate parameter estimates, "VT" substitution model, and a uniform model of rate heterogeneity.
The chosen tree search procedure was Quartet Puzzling and 50000 puzzling steps were computed in order to obtain the consensus tree.
In addition, many of the young men and women in the armed forces are first-time voters, so the procedures can be puzzling.
Sloppy lab procedures caused a puzzling case of SARS in Singapore this month, according to an inquiry headed by Australian biosafety expert Anthony DellAnthony.
This work focused on applying structural knowledge to Biomechanical Engineering and was motivated by the puzzling results obtained during the surgical procedure of skin expansion realized on some patients.
The 20-point gap points to a difficulty facing lawmakers as they sell their proposals to revamp the immigration system: its procedures are unfamiliar and puzzling to many Americans.
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