Your English writing platform
Discover LudwigExact(1)
In these cases, the p-Cytb and the pseudo copies of tRNAPro1, ND6, tRNAGlu1 and tRNAThr2 are usually decayed beyond recognition.
Similar(59)
Since this set might contain pseudo-copies generated by unrelated sequences, it is processed by the following two steps to eliminate pseudo-copies.
2. Detected unrelated sequences derived from other LTR elements and eliminated their pseudo-copies.
These many potential sources of rate variation could greatly exacerbate the phylogenetic uncertainties caused by extra pseudo-copies.
Therefore, we developed an algorithm (see Methods) to discriminate unrelated sequences and discard the matches generated by them (pseudo-copies).
Accordingly, the matches generated by such subregions were eliminated from Part II. 3. Detected unrelated sequences derived from other TEs and eliminated their pseudo-copies.
Although this simple greedy algorithm might fail to deal with a few complicated situations, it identified most of the pseudo-copies efficiently.
The annotation process identified unrelated TE sequences in elements and discarded pseudo-copies, thus estimated the contribution of LTR elements to the genome more accurately.
We first identified candidates of full-length element with LTR_FINDER, then annotated other copies related to them in the genome by homology search and the elimination of pseudo-copies.
As only one pseudogene copy was obtained from each examined line, differential loss would have to remove all but one pseudo-copy in each lineage, which is perhaps unlikely.
To limit pseudo-replication, synthetic copies of three songs from different individuals were used as original control songs.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com