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Hence, this operation provides an alignment based on the highest cross-energy principle.
Figure 3 provides an alignment of the RNase III domains of the mouse, human, Drosophila and C. elegans RNase III orthologues.
Similar(58)
Searching for similar word profiles in distant species provides an alignment-free and highly specific means of looking for conserved motif combinations that may have been greatly permuted.
Instead, AR attempts to provide an alignment that is very close with little difference in terms of the shape Tanimoto and graphical display.
We provide an alignment of all release factors from analyzed bacteria in the nexus format [see Additional file 1].
The main goal is to provide an alignment of residue correspondences, in order to identify homologous residues across chains.
3) P.4, it would be interesting to provide an alignment of primary sequences of LysRS2 and YjeA as supplementary material.
Selenoprofiles is a computational pipeline that, provided an alignment for a protein family, identifies all members of said family encoded in a target genome sequence.
It was produced based on a publication (18 ) providing an alignment of the deduced amino acid sequence of this protein to Erg9p sequences in five other species.
> -wrap-foot> MAQ does not provide an alignment option which adheres to the definition of full sensitivity to greater than two mismatches.
The results for FlexProt were poor and were eliminated from the figures because they may be caused by simple problems reading the PDB numberings, and also it does not provide an alignment score.
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CEO of Professional Science Editing for Scientists @ prosciediting.com