Sentence examples for provides alignments from inspiring English sources

It takes as input either the sequence or the structure of a protein and provides alignments with its homologs along with a variety of structural and functional annotations through an interactive interface.

Rfam provides alignments of the RNA sequences in a family, but these are built with reference to their secondary structure, rather than the evolutionary history of any particular locus.

The BLASTX amino acid based algorithm provides alignments of the six-frame translated EST relative to the protein database and thereby is more sensitive to elements of functionality and homology than DNA alignments and accurately reveals reading frames [ 41, 59].

Additional file 1: Table S2 provides alignment statistics for every sample.

Hyaluronic acid was injected into a custom insertion tool (which provides alignment to the cochleostomy) for lubrication.

Supplementary file 1 provides alignment statistics and Supplementary file 2 contains the oligonucleotides used in this study.

The Vienna RNA Package provides alignment-based variants for several of the algorithms discussed above: RNAalifold [ 50] computes global consensus structures both in MFE and partition function mode, a scanning version of long sequence alignments is RNALalifold.

Since DNNs cannot align context-dependent states to time frames of the training data, an auxiliary GMM triphone system is trained with the ML criterion to provide alignments for the DNN training.

They also provided alignments encompassing LTRs of most of beta-, gamma- and lentiretroviruslike LTRs, presenting further insight into the common LTR structure of these genera.

The J2315 gene sequences were searched against the genomic sequences using the BLASTN algorithm version 2.2.18 (nucleotide level) [36] for matches that provided alignments covering at least 70% of the length of the query sequence (homolog present).

Vertical dotted lines provide alignments between abundant siRNAs and the P4R2 RNAs.