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Four amino acid substitutions in the host receptor-binding protein hemagglutinin, and one in the polymerase complex protein basic polymerase 2, were consistently present in airborne-transmitted viruses.
Processes such as neuromodulation, toxicity, and cell communication can be regulated by natural peptides and protein basic domains.
5) Protein basic information: This includes protein sequence, number of residues, molecular weight and isoelectric point.
Peptides were then further screened for uniqueness by performing a protein basic local alignment search tool search.
16 The retrieved FASTA sequences for the target three capsid cores were submitted to protein basic local alignment search tool (pBLAST) to determine the template protein.
For each protein, basic data, i.e., accession number, organism, brief taxonomy, sequence length and coding origin were reported in a file (publicly available on the FigShare repository http://figshare.com/articles/Catalog_of_Tex19_protein_sequences/1491365 and http://figshare.com/articles/Catalog_of_Sectm1_protein_sequences/1491366).com/articles/Catalog_of_Sectm1_protein_sequences/1491366
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Segments 1 to 3 encode the polymerase proteins: basic polymerase 2 (Pbasicbasic polymerase 1 (PB1), and acidic polymerase (PA), respectively.
In the case of pathway member proteins, basic information also includes pathway memberships and topological properties.
However, in cluster A the well-represented classes included homeobox domain proteins, zinc finger (ZF) proteins, basic helix-loop-helix (bHLH) proteins, and Basic Leucine Zipper (bZIP) proteins.
Multiple sequence alignments of the SlbZIP full proteins, basic regions and Leu zipper domains were performed using ClustalX (version 2.0.8) followed by manual adjustment.
The assay was tested on three different proteins: Myelin Basic Protein (MBP), Histone H1 and Phosphorylated heat- and acid-stable protein (PHAS-1).
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