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In order to avoid this alignment problem, we propose an alignment based on an alphabet composed of three letters (ACT or AGT) instead of a four-letter alphabet (ACGT).
Similar(59)
In this paper, by taking full advantage of local Voronoi neighbor structures (VNSs), e.g. local structural stability and distortion insensitivity, we propose an alignment-free bio-cryptosystem based on fixed-length bit-string representations extracted from modified VNSs, which are rotation- and translation-invariant and distortion robust.
Here, we propose an alignment-free, n-gram based tool, MetaID that can identify the metagenomic taxa at the strain level and also quantify the relative composition of each organism in the sample.
The paper proposes an alignment method based on the reflectionless laser measurements.
Vangbo and Backlund proposed an alignment fork as the pre-etched pattern to determine the ⟨110⟩ directions [102].
We proposed an alignment free cancellable template generation by construction of M rectangles with different orientations around every reference minutiae followed by the calculation of rotation invariant and translation invariant neighboring relation, plane based quantization for bit string generation and matching.
Liao and Jain [18] proposed an alignment-free approach based on a large scale dictionary of SIFT descriptors.
To address this problem, we propose an improved alignment algorithm, named shape Dynamic Time Warping (shapeDTW), which enhances DTW by taking point-wise local structural information into consideration.
In this paper, we propose an effective alignment-free method for constructing cancelable fingerprint templates via curtailed circular convolution.
In addition, we propose a force alignment procedure to correct for the drift in the experimental measure of the opening position, a major source of error.
We propose a new alignment scheme, based on the ORF rings concept, which embodies the positive aspects of the two aforementioned schemes: a closed-form solution and a large number of valid correspondences.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com