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The relative abundance of SAAVs vs. SNVs in a MAG gives an indication of the proportion of variants in a population that affect phenotype.
Coverage (proportion of variants for which a prediction was made) was 57% (95% confidence interval: 49%64%%).
Palla, L. & Dudbridge, F. A fast method that uses polygenic scores to estimate the variance explained by genome-wide marker panels and the proportion of variants affecting a trait.
4c The proportion of variants changes over time.
Students learn the difference between sorting and creative processes, recognizing that natural selection is a sorting process that leads to a change in the proportion of variants over time.
For cancer mutations (CSM), the proportion of variants in solvent inaccessible regions is more than that of SVP but less than SVD.
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Dr. Vogelstein's team found that the proportion of variant mitochondrial DNA in healthy people tended to vary quite widely from one kind of tissue to another.
The false negative rates were the proportion of variant genotypes (i.e., confirmed genotypes with false negative or true positive results) that were not called as variants by each sequencing platform.
A significant parameter that must be determined when assigning genotypes based on NGS data is the cut-off proportion of variant allele reads for a genotype to be called heterozygous or homozygous.
NRS measures the proportion of variant loci identified in the NGS-based data also identified as variants in the array-based data.
We then ranked the genes by proportion of variant sites at which the confidence probability estimated by PHASE was less than one.
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