Sentence examples for proportion of nucleotide differences between from inspiring English sources
DXY, average proportion of nucleotide differences between species.
The parameter π was estimated as the average proportion of nucleotide differences between all possible pairs of sequences in the sample [ 56].
We also investigated whether lost alleles tended to be more divergent than other alleles in the dataset, as measured by proportion of nucleotide differences between a pair of sequences (uncorrected p) calculated in MEGA v4.0 [ 46].
The results from computing the proportion of nucleotide differences between each pair of LTR sequences showed that no LTR pair of a single LTR retrotransposon was clustered together implying that the retrotransposons were duplicated rather than re-inserted via a intermediate RNA.
We ran a number of simulations to ascertain the nucleotide diversity, measured as the per-site proportion of nucleotide differences between random pairs of sequences in the population, as a function of the population size N and the selective coefficient of advantageous mutations s.
The nucleotide diversity indicator π (average proportion of nucleotide differences between all possible pairs of sequences) [ 45] was calculated for each alignment using the effective length of the multiple sequence alignment (not considering regions of the alignment where the depth was 1) as the total number of available sites.
Tm optimum temperature, Similarity % similarity to the nearest validated species, Base pair differences the number of nucleotide differences between the isolates and the nearest validated species, R resistance.
Nucleotide diversities represent the average number of nucleotide differences between two sequences at a given site.
This number of differences is similar to the average number of nucleotide differences between two unrelated European Caucasians [6].
Briefly, in this method, the number of nucleotide differences between the segments of any two strains is calculated.
Nucleotide diversity was measured using π, the average number of nucleotide differences between sequences pairs [ 32].
