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Thus, a 2011 study found "an extraordinarily high proportion of genera" were not monophyletic, so were not all descendants of a single common ancestor.
The proportion of genera in which species in a pair could be differentiated also varied widely among loci (Table 1; Figure 3).
If universal application is incorporated and all genera are considered, then the overall proportion of genera in which species in a pair were differentiated dropped considerably in ITS1 (45.8%) while trnH-psbA maintained the highest resolution (79.1%) and rbcL-a the second highest (62.5%) with values for all other loci at 50% or less.
Andrenidae has a lower proportion of genera sampled relative to other bee families, and its phylogenetic placement is uncertain.
Ngenera and Nspecies represent the number of genera and species described in Wilson and Reeder (2005); gGENBANK and spGENBANK represent the number of genera and species available in GENBANK; Percentage represents the proportion of genera and species included in our study.
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Correlation analysis of log proportions of genera identified in scrape versus swab sampling confirmed the similarity of techniques (R = 0.87, P <2.2 × 10-16, data not shown).
Lyellian percentages were used to determine the proportion of surviving genera in each region.
Therefore, a large proportion of tree genera distributed outside the South African borders (32%) were not collected.
The number of cohesive groups was summed for each NJ tree to finally give a proportion of total genera in Table 1.
The proportion of core genera in L1U/L differed from other TP samples in that it contained Thiobacillus, Conexibacter, Nitrospira, Burkholderia, Chitinophaga, and a few others.
This large proportion of unassigned genera among highly abundant OTUs highlights the need for more traditional studies characterizing bacteria and their phenotypic traits to better understand the function of the equine hindgut microflora.
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