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When the TFV sequence from TSAd-SH2 was in silico replaced with the GYT sequence in the ALX-SH2 domain sequence, the TANGO algorithm predicted an increase in beta-aggregation propensity corresponding to the TFV sequence (Table 2).
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Each matrix A[ q ] in this decomposition comes from just the transition propensities corresponding to reaction q, and is defined by (21) A ii [ q ] = − ∏ k = 1 n (x k (i ) ) σ kq A ij [ q ] = ∏ k = 1 n (x k (j ) ) σ kq if x (j ) = x (i ) + v q 0 otherwise.
In such cases, the predicted TMH propensity scores corresponding to the short loop residues will also be very high due to the sliding window technique used for extracting features.
We will then trim the sample by excluding patients with a propensity score corresponding with the 2.5th centile or lower in the varenicline, respectively bupropion group and by excluding patients with a propensity score corresponding with the 97.5th centile or higher in the NRT Rx group.
In the case of flagella phenotype, the PP approach identifies 46 highest-propensity COGs, corresponding to 60 E.coli proteins.
The dynamics of variables × = (L, X ) is described by the following reactions together with the corresponding propensity functions (14) Reaction Propensity function D N A → k 1 (9 L, X ) a 1 = k 1, (X, L ) → k (X, L - 1 ) a 2 = k ⋅ X ⋅ (1 - f (L, X, 9 ) ), (X, L ) → k (X, L - 1, L - 1 ) a 3 = k ⋅ X ⋅ f (L, X, 9 ).
In particular, they need to be re-emphasised in laparoscopic surgery and in the treatment of endometriosis, where there is heightened inflammatory response and angiogenesis, with a corresponding propensity for adhesion development [7] (Table 1).
We represent the ten most important polycenters defined in the dendrogram of Figure 4, and show the corresponding propensity to anisotropy comparing actual flows with the null model defined above (see Methods).
The predefined neighborhood was determined by estimating the radius as one-fourth of the standard deviation of the corresponding propensity scores [ 37– 37].
It is often implicitly assumed that the rate of a dynamic process can be directly taken as the propensity for a corresponding stochastic process.
To analyse the association between different measures of adherence and clinical outcomes, Cox proportional hazard models will be used again, adjusting for the corresponding propensity scores.
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