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The hmmfetch program was used to extract each significant HMM profile corresponding to functional domains previously identified in mammalian midbody components.
This program was used to extract raw sequences from the GenBank-formatted documents.
The Feature Extraction program was used to extract the spot intensities.
A custom-written MATLAB program was used to extract nuclei boundaries.
The SMART program was used to extract the protein sequences of the WRKY domain for each protein.
The BLAT program was used to extract the paralogous copies of the ten families from the PN40024 genome [ 40].
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That is, the program is used to extract the features, and the human observer confirms the accuracy of the measurements through visual assessment.
For prescriptions, the dosage instructions are in the form of free text, and a computer program is used to extract numerical values and dose units for research purposes [ 18].
Custom MATLAB (Mathworks, Natick, MA) programs were used to extract 3.5 ms spike waveforms from the continuous data.
The EMBOSS suite [ 24, 25] program MARsearch was used to extract the presence of S/MARs and the dreg program to extract the Poly dA-dT) and (CCGNN)n sequences Poly dA-dT the 5' and 3' regions of eaCCGNN nsequences
A receptor-based pharmacophore modeling program Pocket v.2 was used to extract pharmacophore features within cavities [21].
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