Sentence examples for profile alignment from inspiring English sources

ClustalX v1.83 was used for profile alignment and to manage aligned sequences (Thompson et al. 1994).

In the case of SerRS and ThrRS, the respective protein family alignments were subsequently aligned in an additional profile alignment step.

Final assembling of each aligned group was performed using profile alignment generating a final dataset of 6,244 sites.

The genes from these genomes were retrieved and aligned to the iTOL genes as a profile alignment in ClustalW v1.83 [ 30].

The query sequence is aligned on top of the profile by the CLUSTALW profile alignment algorithm.

A query sequence is aligned to the three-domain subset using the CLUSTALW profile alignment method [40].

As a surrogate, we aligned the sequences in stages where we used a sensitive profile-profile alignment stage to align sequences across subtypes.

This program works by combining the folds and secondary structure by profile-profile alignment threading techniques for non-aligned regions.

Subsequently, these alignments were aligned using the profile-profile alignment option in MUSCLE.

These resulting separate DHA1 and SP PRALINETM alignments were then aligned together by using the profile-profile alignment option of MUSCLE [27].

Inner nodes can either be aligned to a leaf node or to another inner node (profile-profile alignment).