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One tube was processed according to the prototype magnetic bead processing protocol (Microsens Medtech Ltd., London, UK).
Slides were washed and processed according to the Agilent 60-mer Oligo Microarray Processing protocol and scanned on a Agilent microarray scanner G2565BA (Agilent Technologies).
RNA samples were then processed according to the Affymetrix Eukaryotic Sample and Array Processing protocol.
HPCa processing protocol was previously described49.
The data processing protocol discards outlier data points and the origin of the outliers is investigated.
Human assigned reads in dental calculus are shorter than expected independent of age, laboratory processing protocol, or sample preservation.
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The data-processing protocol will be added to this page once completed.
Figure 2: Minimal sample-processing protocol performed in an enclosed volume is amenable to automation and scaling.
In particular, an often overlooked aspect of data derived from AP MS experiments is the influence of the post-processing protocol on the final binary interaction map.
Where raw Affymetrix microarray data were available, we used a standardized pre-processing protocol.
Conversely, in the case of MammaPrint, although the original discovery and validation datasets [ 3, 19] are available, the pre-processing protocol and prediction algorithm are only partially described.
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CEO of Professional Science Editing for Scientists @ prosciediting.com