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Previous genome-wide approaches used a wide range of procedures to infer sequences more identical than expected given the phylogeny of the species to detect HTs in eukaryotes (Loreto et al. 2008; Wallau et al. 2012).
A number of recent studies, all using McDonald Kreitman (MK -like statistical procedures to infer selection (i.e., coMK -likestatisticaland nonsynonymous proceduressms wito dinference; McDonald and Kreitman 1991), eselectionNe s < 100 in Drosophila (Sawyer et al.e2003; Andolfatto 2007; Eyre-Walker and Keightley 2009).
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Conversely, ray-tracing can be used as part of an inversion procedure to infer the anisotropic properties from measured time-of-flight data.
We have also examined the delicate issue of performance evaluation and defined the error as a function of wavelength, using a metrological procedure to infer the uncertainty of the computed error from the statistics of the measured variables.
The error has been defined as a function of wavelength, using a metrological procedure to infer the uncertainty of the computed error from the statistics of the measured variables.
Maximum likelihood SNP trees were inferred with RaxML 7.0.4 [ 47] using the rapid bootstrap procedure to infer non-parametric bootstrap values.
In contrast to APN's local network changes, Réd applies a global procedure to infer the relationships between genes and does not require ensembling.
However, their non-parametric approach to learning the models requires strict data assumptions and employs a time-consuming procedure to infer Z.
In this context, Schadt et al. [ 7] have proposed a multi-step procedure to infer causal relationships between two phenotypic traits and a common QTL.
This fully automated first round of annotation ends with a functional assignation procedure to infer, as precisely as possible, specific function(s) for each individual gene.
We, therefore, developed an automated supermatrix procedure to infer phylogenies for a large sample of vertebrate diversity targeted at these shallow levels of divergence (see Methods section and Additional File 1).
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