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As mentioned in Section 2.1.1, the procedure to score matches assumes that the size of sequence fragments is largely accurate in order to suggest a value for Cσ.
The network nodes corresponding to the target genes are then used as seed nodes for a random walk procedure to score their distances to all reference datasets.
We employ a postprocessing procedure to score the resulting trees, but as this potentially involves refining trees to binary trees, it has a worst case run time that is exponential in the number of leaves of the resulting trees (although the score for a single refined tree can be computed by the algorithm M ULTIB UILD in polynomial time).
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The comparison of QTLs among studies and species is also made difficult due to the large varieties of experimental procedures used to score phenotypic traits.
In the present study, a high correlation rate among the three procedures used to score HER-2 status in breast carcinomas was observed.
Repeating this procedure to obtain a score for each candidate gene, we are able to rank the candidate genes in non-increasing order according to their scores to obtain a ranking list.
The procedure to obtain the score was explained in approximately half of the models (56%), however in those that used logistic regression only 19% included a user-friendly presentation.
Patients were then followed up 24 hours after the procedure to assess their pain score, retrospective pain score and willingness to have a repeat procedure.
Based on these data, our method resorts to a linear regression model and a hypothesis testing procedure to derive 7 scores that quantify the strength of association between a query disease and a candidate gene from different perspectives, and further adopts the Fisher's method with dependence correction to combine these scores.
Patients were then followed up with a telephone call 24 hours after the procedure to assess their pain scores, retrospective pain scores and willingness to have a repeat procedure if it was required in the future.
This is a simple replica-plating procedure commonly used to score the mat1 marker of S. pombe crosses (Bresch et al. 1968).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com