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It avoids discretization by this way and integrates the procedure of clustering.
Using our simple semi-automatic procedure of clustering, we easily achieved full A. thaliana/ O. sativa cluster curation as gene families suitable for phylogenomics analysis.
The procedure of 'Clustering' and 'Regression' are addressed with a concrete experiment in Section 3.
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Faced to the difficulty to design a general purpose clustering algorithm and to choose a good, let alone perfect, set of criteria for clustering a data set, one solution is to resort to a variety of clustering procedures based on different techniques, parameters and/or initializations, in order to construct one (or several) final clustering(s).
The proposed method is composed of two procedures: clustering of training HR patches and estimation of missing high-frequency components of a target image.
Unlike NCBI's UniGene procedure which only gathers similar ESTs together, the TIGR gene index procedure allows clustering of ESTs based on a pre-selected criterion (base pair identity in this case).
In [20], the authors proposed altering the procedure of data clustering and feature selection iteratively.
The collective clustering algorithm involves an iterative procedure of recalculating cluster similarities and therefore requires even more computation.
LC and MP designed the procedure for clustering of SLSs into families.
In addition, we carried out the same procedure of representing and clustering HMMer hits based on sets of 65 randomly chosen profiles from the Pfam database of protein families (Punta et al. 2011); a separation of parasites from free-living species never occurred (data not shown).
In the initial steps of the iterative clustering procedure (see Sequence clustering part of the Materials and Methods section) only tight clusters of highly similar sequences are formed.
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